YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12323288, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLIATLLFL SARLTTAGNM NSFAGVCYGR NGDNLPSPAK TVSLYKKINV GGIRLYEPFP  60
   61 DLIVSLQGTG LLVAIGPRNE AIKTLAEEYQ FALNWDKTFI APYKNVAFNW ITVGNEVIEG 120
  121 EIGRYVPQAM KNIKAALTEI GNSKIHVTTV ISTAALANSY PPSAGVFKPA ITELITEIVS 180
  181 ILSSTDSPLM VNVYPYFAYA SDPSHVSLEY ATFRSTSPVV TDGKYQYTNI FDATLDAFNV 240
  241 ALEKINHGSV KVYVAETGWP TRGNDPYTSV ENARAYNQGL LKKLTTGKGT PRRPNVPVIT 300
  301 FFFEMFNEDL KQGAVEQSFG FFDPNMAPVY DMWNIARTSN ASPSWVIWTN WVIWTMLITR 360
  361 LFY

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	363	0.98