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Protein Overview: PRS4A_ARATH

General Information:
Name(s) found: PRS4A_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T08959 proteinase homolog F19B15.70 - Arabidopsis thaliana [NCBI NR]
  • gi|7269802|emb|CAB79662.1| 26S proteasome subunit 4-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4972050|emb|CAB43918.1| 26S proteasome subunit 4-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|46917379|dbj|BAD18016.1| 26S proteasome subunit AtRPT2a [Arabidopsis thaliana] [NCBI NR]
  • gi|15235544|ref|NP_194633.1| RPT2a (regulatory particle AAA-ATPase 2a); ATPase [Arabidopsis thaliana] [NCBI NR]
  • gi|14334604|gb|AAK59480.1| putative 26S proteasome subunit 4 [Arabidopsis thaliana] [NCBI NR]
  • 26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=1 SV=1 [Swiss-Prot]
  • (Q9SZD4) 26S proteasome subunit 4-like protein (Putative 26S proteasome subunit) [athaliana3702.FASTAC.txt]
  • putative 26S proteasome subunit 4 [Arabidopsis thaliana]gi|7269802|emb|CAB79662.1| 26S proteasome subunit 4-like protein [Arabidopsis thaliana]gi|4972050|emb|CAB43918.1| 26S proteasome subunit 4-like protein [Arabidopsis thaliana]gi|46917379|dbj|BAD180 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 26S proteasome AAA-ATPase subunit (RPT2a) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RPT2A | RPT2A (REGULATORY PARTICLE AAA-ATPASE 2A); ATPase | chr4:14312375-14314392 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • RPT2A; ATPase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 26S proteasome subunit AtRPT2a [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 26S proteasome subunit 4-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative 26S proteasome subunit 4 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RPT2a | regulatory particle AAA-ATPase 2A | chr4:14312369-14314386 FORWARD LENGTH=443 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 443 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    proteasome regulatory particle, base subcomplex [IDA]
    membrane [IDA]
    Biological Process: meristem growth [IMP]
    root cap development [IMP]
    response to cadmium ion [IEP]
    phyllome development [IMP]
    proteasome assembly [IMP]
    meristem structural organization [IMP]
    leaf morphogenesis [IMP]
    [NOT]proteasome core complex assembly [IMP]
    ubiquitin-dependent protein catabolic process [TAS]
    root development [IMP]
    response to heat [IMP]
    proteasomal ubiquitin-dependent protein catabolic process [IMP]
    shoot development [IMP]
    maintenance of root meristem identity [IMP]
    lateral root primordium development [IMP]
    root morphogenesis [IMP]
    response to misfolded protein [IMP]
    Molecular Function: ATPase activity [IGI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQGPSGGLN RQGDRKPDGG DKKEKKFEPA APPARVGRKQ RKQKGPEAAA RLPTVTPSTK  60
   61 CKLRLLKLER IKDYLLMEEE FVANQERLKP QEEKAEEDRS KVDDLRGTPM SVGNLEELID 120
  121 ENHAIVSSSV GPEYYVGILS FVDKDQLEPG CSILMHNKVL SVVGILQDEV DPMVSVMKVE 180
  181 KAPLESYADI GGLEAQIQEI KEAVELPLTH PELYEDIGIK PPKGVILYGE PGTGKTLLAK 240
  241 AVANSTSATF LRVVGSELIQ KYLGDGPKLV RELFRVADDL SPSIVFIDEI DAVGTKRYDA 300
  301 HSGGEREIQR TMLELLNQLD GFDSRGDVKV ILATNRIESL DPALLRPGRI DRKIEFPLPD 360
  361 IKTRRRIFQI HTSKMTLSED VNLEEFVMTK DEFSGADIKA ICTEAGLLAL RERRMKVTHP 420
  421 DFKKAKEKVM FKKKEGVPEG LYM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..443] PSI-BLAST 86.522879 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle