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Protein Overview: gi|15240117, gi|...

General Information:
Name(s) found: gi|15240117 [NCBI NR]
gi|10178120 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|15240117|ref|NP_196282.1| proline-rich extensin-like family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10178120|dbj|BAB11413.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 689 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: plant-type cell wall organization [IEA]
    Molecular Function: structural constituent of cell wall [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKYNIKPKQ INKNKEMGMM RSSRTMGLGH CMVYVVVLSA IAATVTSYPY SSPYSSPQTP  60
   61 HYNSPSHEHK SPKYAPHPKP YVYISPPPPS YYSPSPKVNY KSPPPPNVYN SPPPPYYSPS 120
  121 PKVDYKSPPP PYVYSSPPPP YYSPSPKVDY KSPPPPYVYS SPPPPYYSPS PKVEYKSPPP 180
  181 PYVYNSPPPP YYSPSPKIEY KSPPPPYVYS SPPPPYYSPS PKVDYKSPPP PYVYNSPPPP 240
  241 YYSPSPKVDY KSPPPPYVYS SPPPPYFSPS PKVEYKSPPP PYVYNSPPPP YYSPSPKVEY 300
  301 KSPPPPYVYS SPPPPYYSPS PKVYYKSPPP PYVYSSPPPP YYSPSPKVDY KSPPPPYVYS 360
  361 SPPPPYYSPS PKVDYKSPPP PYVYSSPPPQ YYSPSPKVAY KSPPPPYVYS SPPPPYYSPS 420
  421 PKVAYKSPPP PYVYSSPPPP YYSPSPKVDY KSPPPPYVYS SPPPPYYSPS PKVEYKSPPP 480
  481 PYVYSSPPPP YYSPSPKVEY KSPPPPYVYS SPPPPYHSPS PKVNYKSPPP PYVYSSHPPP 540
  541 YYSPSPKVNY KSPPPPYVYS SPPPPYYSPS PKVNYKSPPP PYVYSSPPPP YYSPSPMVDY 600
  601 KSTPPPYVYS FPPLPYYSPS PKVDYKSPPL PYVYSSPPPL YYSPSPKVHY KSPPPPYVYN 660
  661 SPPPPYYSPS PKVTYKSPPP PYVYKAPYY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] deduced N/A No confident structure predictions are available.
    2 View Details [142..341] MSA 2.126992 View MSA. No confident structure predictions are available.
    3 View Details [342..452] deduced N/A No confident structure predictions are available.
    4 View Details [453..689] MSA 3.124995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle