YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SCL30_ARATH

General Information:
Name(s) found: SCL30_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 583 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: regulation of transcription [TAS]
    response to chitin [IEP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAILPVPVD GFRFDTGSGS CCKPRNNLES GTTNRFTCFN ESESQSNPSP TESKVCSDYL  60
   61 PVFKYINDML MEEDLEGQSC MLEDSLALQA AERSFFEVLQ DQTPISGDLE DGSLGNFSSI 120
  121 TSLHQPEVSE ESTRRYRHRD DDEDDDLESG RKSKLPAIST VDELAEKFEE VLLVCQKNDQ 180
  181 GEATEKKTRH VKGSSNRYKQ QKSDQPVDMR NLLMQCAQAV ASFDQRRAFE KLKEIREHSS 240
  241 RHGDATQRLG YHFAEALEAR ITGTMTTPIS ATSSRTSMVD ILKAYKGFVQ ACPTLIMCYF 300
  301 TANRTINELA SKATTLHIID FGILYGFQWP CLIQALSKRD IGPPLLRVTG IELPQSGFRP 360
  361 SERVEETGRR LKRFCDKFNV PFEYSFIAKN WENITLDDLV INSGETTVVN CILRLQYTPD 420
  421 ETVSLNSPRD TALKLFRDIN PDLFVFAEIN GTYNSPFFLT RFREALFHCS SLFDMYETTL 480
  481 SEDDNCRTLV ERELIIRDAM SVIACEGSER FARPETYKQW QVRILRAGFR PAKLSKQIVK 540
  541 DGKEIVKERY HKDFVIDNDN HWMFQGWKGR VLYAVSCWKP AKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..199] MSA 6.101997 View MSA. No confident structure predictions are available.
    2 View Details [200..418] MSA 2.139953 View MSA. No confident structure predictions are available.
    3 View Details [419..583] MSA 5.14196 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle