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Protein Overview: PPD_ARATH

General Information:
Name(s) found: PPD_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Probable pheophorbidase OS=Arabidopsis thaliana GN=PPD PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 262 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: NONE FOUND
    Molecular Function: hydrolase activity, acting on ester bonds [IDA]
    methyl indole-3-acetate esterase activity [IDA]
    catalytic activity [ISS]
    methyl jasmonate esterase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGEGGAEPV IHFVFVHGAS HGAWCWYKLT TLLDAAGFKS TSVDLTGAGI SLIDSNIVFD  60
   61 SDQYNRPLFS LLSDLPPHHK VILVGHSIGG GSVTEALCKF TDKISMAIYL AASMVQPGSI 120
  121 PSPHLSNIHV GEEDIWEYTY GEGTDKPPTG VLMKPEFIRH YYYSQSPLED VTLSSKLLRP 180
  181 APMRAFQDLD KLPPNPEAEK VPRVYIKTAK DNLFDSVRQD LLVENWPPSQ LYVLEDSDHS 240
  241 AFFSVPTTLF AYLLRAVSFL QR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..262] PSI-BLAST 27.09691 Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.76673721118052 bayes_pls_golite062009
  • carboxylesterase activity
    		•  0.73967567655491 bayes_pls_golite062009
  • lipase activity
    		•  0.51002916472898 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.0940814269146387 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.69

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle