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Protein Overview: gi|15221934, gi|...

General Information:
Name(s) found: gi|15221934 [NCBI NR]
gi|12597809 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|15221934|ref|NP_175300.1| auxin-responsive GH3 family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12597809|gb|AAG60120.1|AC073555_4 Nt-gh3 deduced protein, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 525 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to auxin stimulus [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNPSLNLMD LEELTSNAKQ IQEDVLEEIL TLNANTEYLH RFLHGSSDKV LFKKNVPVVT  60
   61 YDDVKPYIER VANGEPSDVI SGGPITMFLR STGTSGGKQK VFPVNDKYIE KLGYVIALRS 120
  121 LAMSKHFDSG GEQGKAMEFH CTKPPSATPS GLPRDEVVRV GAAFAFVLVR AIDFLEKHWK 180
  181 ELCSNIRSGH VSEWITDLEG RNAVSTILRG PDSILADVIE QECSHKSWEG IITRLWPKAK 240
  241 YIDCIITGQM SQYIPMLEFY SNKLPIVSTT YGSSESTFGM NVDPLCKPQD TSYTCAPNIS 300
  301 YFEFLPVDHK GDMASIVDLV DVKLGCYYEP VVTNYFGLHR YLIGDILQVT GFYNNTPQFR 360
  361 FVHRKNVVLS VRSETTTEED ILKALNHVGL VLESSDLMLM GFTCYADIST FPGHYVFYWE 420
  421 LKAKDVQDVF ELEEKVMVKC CSLLEESFDE VYRKNRSKDE CIGPLEIRVV QQGTFDSLME 480
  481 YFISQGGSIA QYKTPICINS SEALAVLENK VLARFFSEKS PPLDS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..525] FFAS03 3.28 Acetyl-CoA synthetase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.1635513199224 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle