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View Structure Prediction Details

Protein: gi|15221934, gi|...
Organism: Arabidopsis thaliana
Length: 525 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15221934, gi|....

Description E-value Query
Range
Subject
Range
gi|4468805, gi|1... - pir||T04733 auxin-regulated protein GH3 homolog F6G17.40 - Arabidopsis thaliana, gi|7270721|emb|CAB...
675.0 [0..6] [521..22]

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Predicted Domain #1
Region A:
Residues: [1-525]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNPSLNLMD LEELTSNAKQ IQEDVLEEIL TLNANTEYLH RFLHGSSDKV LFKKNVPVVT  60
   61 YDDVKPYIER VANGEPSDVI SGGPITMFLR STGTSGGKQK VFPVNDKYIE KLGYVIALRS 120
  121 LAMSKHFDSG GEQGKAMEFH CTKPPSATPS GLPRDEVVRV GAAFAFVLVR AIDFLEKHWK 180
  181 ELCSNIRSGH VSEWITDLEG RNAVSTILRG PDSILADVIE QECSHKSWEG IITRLWPKAK 240
  241 YIDCIITGQM SQYIPMLEFY SNKLPIVSTT YGSSESTFGM NVDPLCKPQD TSYTCAPNIS 300
  301 YFEFLPVDHK GDMASIVDLV DVKLGCYYEP VVTNYFGLHR YLIGDILQVT GFYNNTPQFR 360
  361 FVHRKNVVLS VRSETTTEED ILKALNHVGL VLESSDLMLM GFTCYADIST FPGHYVFYWE 420
  421 LKAKDVQDVF ELEEKVMVKC CSLLEESFDE VYRKNRSKDE CIGPLEIRVV QQGTFDSLME 480
  481 YFISQGGSIA QYKTPICINS SEALAVLENK VLARFFSEKS PPLDS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.28
Match: 1pg3A
Description: Acetyl-CoA synthetase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.1635513199224 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle