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Protein Overview: gi|15237657, gi|...

General Information:
Name(s) found: gi|9759403 [NCBI NR]
gi|15237657 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|9759403|dbj|BAB09858.1| nuclear protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|15237657|ref|NP_201232.1| splicing factor, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1269 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: mRNA processing [ISS]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLDPEIAK TQEERRKMEA DLASLTSLTF DRDLYGGNDR ASYSTSIAPN EEDDANLDTT  60
   61 GSLVAQRLAS YTAPRSILND VARPHNEDDD VGFKPRQSIA EREGEYRNRR LNRVLSPDRV 120
  121 DAFAMGDKTP DASVRTYTDH MRETALQREK EETMRLIAKK KKEEEEAAAK HQKDSAPPPP 180
  181 ASSSSSSSKR RHRWDLPEED GAAAKKAKAA SSDWDLPDAA PGIGRWDAPT PGRVSDATPS 240
  241 AGRRNRWDET PTPGRVTDSD ATPGGGVTPG ATPSGVTWDG LATPTPKRQR SRWDETPATM 300
  301 GSATPMGGVT PGAAYTPGVT PIGGIDMATP TPGQLIFRGP MTPEQLNMQR WEKDIEERNR 360
  361 PLSDEELDAM FPKDGYKVLD PPATYVPIRT PARKLQQTPT PMATPGYVIP EENRGQQYDV 420
  421 PPEVPGGLPF MKPEDYQYFG SLLNEENEEE LSPEEQKERK IMKLLLKVKN GTPPQRKTAL 480
  481 RQLTDKAREL GAGPLFNKIL PLLMQPTLED QERHLLVKVI DRILYKLDEM VRPYVHKILV 540
  541 VIEPLLIDED YYARVEGREI ISNLSKAAGL ASMIAAMRPD IDNIDEYVRN TTARAFSVVA 600
  601 SALGIPALLP FLKAVCQSKR SWQARHTGIK IVQQIAILIG CAVLPHLRSL VEIIEHGLSD 660
  661 ENQKVRTITA LSLAALAEAA APYGIESFDS VLKPLWKGIR SHRGKVLAAF LKAIGFIIPL 720
  721 MDAIYASYYT KEVMVILIRE FQSPDEEMKK IVLKVVKQCV STEGVEPEYI RSDILPEFFR 780
  781 NFWTRKMALE RRNYKQLVET TVEVANKVGV ADIVGRVVED LKDESEQYRR MVMETIDKVV 840
  841 TNLGASDIDA RLEELLIDGI LYAFQEQTSD DANVMLNGFG AVVNALGQRV KPYLPQICGT 900
  901 IKWRLNNKSA KVRQQAADLI SRIAVVMKQC GEEQLMGHLG VVLYEYLGEE YPEVLGSILG 960
  961 ALKAIVNVIG MTKMTPPIKD LLPRLTPILK NRHEKVQENC IDLVGRIADR GAEFVPAREW1020
 1021 MRICFELLEM LKAHKKGIRR ATVNTFGYIA KAIGPQDVLA TLLNNLKVQE RQNRVCTTVA1080
 1081 IAIVAETCSP FTVLPALMNE YRVPELNVQN GVLKSLSFLF EYIGEMGKDY IYAVTPLLED1140
 1141 ALMDRDLVHR QTAASAVKHM ALGVAGLGCE DALVHLLNFI WPNIFETSPH VINAVMEAIE1200
 1201 GMRVALGAAV ILNYCLQGLF HPARKVREVY WKIYNSLYIG AQDTLVAAYP VLEDEQNNVY1260
 1261 SRPELTMFV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..445] PSI-BLAST 26.69897 No description for 1y0fA was found.
    2 View Details [446..1269] PSI-BLAST 142.0 No description for 2qmrA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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