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View Structure Prediction Details

Protein: gi|15237657, gi|...
Organism: Arabidopsis thaliana
Length: 1269 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|15237657, gi|....

Predicted Domain #1
Region A:
Residues: [1-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLDPEIAK TQEERRKMEA DLASLTSLTF DRDLYGGNDR ASYSTSIAPN EEDDANLDTT  60
   61 GSLVAQRLAS YTAPRSILND VARPHNEDDD VGFKPRQSIA EREGEYRNRR LNRVLSPDRV 120
  121 DAFAMGDKTP DASVRTYTDH MRETALQREK EETMRLIAKK KKEEEEAAAK HQKDSAPPPP 180
  181 ASSSSSSSKR RHRWDLPEED GAAAKKAKAA SSDWDLPDAA PGIGRWDAPT PGRVSDATPS 240
  241 AGRRNRWDET PTPGRVTDSD ATPGGGVTPG ATPSGVTWDG LATPTPKRQR SRWDETPATM 300
  301 GSATPMGGVT PGAAYTPGVT PIGGIDMATP TPGQLIFRGP MTPEQLNMQR WEKDIEERNR 360
  361 PLSDEELDAM FPKDGYKVLD PPATYVPIRT PARKLQQTPT PMATPGYVIP EENRGQQYDV 420
  421 PPEVPGGLPF MKPEDYQYFG SLLNE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 1y0fA
Description: No description for 1y0fA was found.

Predicted Domain #2
Region A:
Residues: [446-1269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENEEELSPEE QKERKIMKLL LKVKNGTPPQ RKTALRQLTD KARELGAGPL FNKILPLLMQ  60
   61 PTLEDQERHL LVKVIDRILY KLDEMVRPYV HKILVVIEPL LIDEDYYARV EGREIISNLS 120
  121 KAAGLASMIA AMRPDIDNID EYVRNTTARA FSVVASALGI PALLPFLKAV CQSKRSWQAR 180
  181 HTGIKIVQQI AILIGCAVLP HLRSLVEIIE HGLSDENQKV RTITALSLAA LAEAAAPYGI 240
  241 ESFDSVLKPL WKGIRSHRGK VLAAFLKAIG FIIPLMDAIY ASYYTKEVMV ILIREFQSPD 300
  301 EEMKKIVLKV VKQCVSTEGV EPEYIRSDIL PEFFRNFWTR KMALERRNYK QLVETTVEVA 360
  361 NKVGVADIVG RVVEDLKDES EQYRRMVMET IDKVVTNLGA SDIDARLEEL LIDGILYAFQ 420
  421 EQTSDDANVM LNGFGAVVNA LGQRVKPYLP QICGTIKWRL NNKSAKVRQQ AADLISRIAV 480
  481 VMKQCGEEQL MGHLGVVLYE YLGEEYPEVL GSILGALKAI VNVIGMTKMT PPIKDLLPRL 540
  541 TPILKNRHEK VQENCIDLVG RIADRGAEFV PAREWMRICF ELLEMLKAHK KGIRRATVNT 600
  601 FGYIAKAIGP QDVLATLLNN LKVQERQNRV CTTVAIAIVA ETCSPFTVLP ALMNEYRVPE 660
  661 LNVQNGVLKS LSFLFEYIGE MGKDYIYAVT PLLEDALMDR DLVHRQTAAS AVKHMALGVA 720
  721 GLGCEDALVH LLNFIWPNIF ETSPHVINAV MEAIEGMRVA LGAAVILNYC LQGLFHPARK 780
  781 VREVYWKIYN SLYIGAQDTL VAAYPVLEDE QNNVYSRPEL TMFV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 142.0
Match: 2qmrA
Description: No description for 2qmrA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle