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Protein Overview: gi|20197008, gi|...

General Information:
Name(s) found: gi|4191774 [NCBI NR]
gi|25411906 [NCBI NR]
gi|20197008 [NCBI NR]
gi|15224778 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|4191774|gb|AAD10143.1| putative beta-1,3-glucanase [Arabidopsis thaliana] [NCBI NR]
  • pir||G84576 probable beta-1,3-glucanase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20197008|gb|AAM14870.1| putative beta-1,3-glucanase [Arabidopsis thaliana] [NCBI NR]
  • gi|15224778|ref|NP_179534.1| glycosyl hydrolase family 17 protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 478 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    anchored to membrane [TAS]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLAFVVGF GIMGIVMVDG LGVNWGTMAT HKLPPKKVVQ MLKDNNINKV KLFDADETTM  60
   61 SALSGSGLEV MVAIPNDQLK VMGSYDRAKD WVHKNVTRYN FNGGVNITFV AVGNEPFLKS 120
  121 YNGSFINLTF PALQNIQNAL NEAGLGSSVK ATVPLNADVY DSPSSNPVPS AGRFRPDIIG 180
  181 QMTQIVDFLG NNSAPITINI YPFLSLYGND DFPLNYAFFD GAKPVDDNGI AYTNVFDANF 240
  241 DTLVSALKAV GHGDMPIIVG EVGWPTEGDK HANSGSAYRF YNGLLPRLGE NRGTPLRPTY 300
  301 IEVYLFGLLD EDAKSIAPGE FERHWGIFKF DGQPKFPIDL SGQGQNKLLI GAENVTYQPK 360
  361 KWCMFNTEAK DLTKLAANID YACTFSDCTA LGYGSSCNTL DANGNASYAF NMYFQVKNQD 420
  421 EDACIFQGLA TITTKNISQG QCNFPIQIVA STASSFSSSL VLLIAGVWFL LSGVMFEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..349] PSI-BLAST 86.0 Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome
    2 View Details [350..478] Pfam 36.769551 No description for PF07983.4 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle