YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20197008, gi|...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.22
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLAFVVGF GIMGIVMVDG LGVNWGTMAT HKLPPKKVVQ MLKDNNINKV KLFDADETTM  60
   61 SALSGSGLEV MVAIPNDQLK VMGSYDRAKD WVHKNVTRYN FNGGVNITFV AVGNEPFLKS 120
  121 YNGSFINLTF PALQNIQNAL NEAGLGSSVK ATVPLNADVY DSPSSNPVPS AGRFRPDIIG 180
  181 QMTQIVDFLG NNSAPITINI YPFLSLYGND DFPLNYAFFD GAKPVDDNGI AYTNVFDANF 240
  241 DTLVSALKAV GHGDMPIIVG EVGWPTEGDK HANSGSAYRF YNGLLPRLGE NRGTPLRPTY 300
  301 IEVYLFGLLD EDAKSIAPGE FERHWGIFKF DGQPKFPIDL SGQGQNKLLI GAENVTYQPK 360
  361 KWCMFNTEAK DLTKLAANID YACTFSDCTA LGYGSSCNTL DANGNASYAF NMYFQVKNQD 420
  421 EDACIFQGLA TITTKNISQG QCNFPIQIVA STASSFSSSL VLLIAGVWFL LSGVMFEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle