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Protein Overview: RK13_ARATH

General Information:
Name(s) found: RK13_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • 50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana GN=RPL13 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 241 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    ribosome [ISS]
    thylakoid [IDA]
    Biological Process: embryonic development ending in seed dormancy [NAS]
    translation [ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLCSSSTV ILSSSSVKSS GSERKSPFLG FSLTAISKPS VRVGIYANSK RGLQVKCEAE  60
   61 PTTTTSLVPA NQRWMFDEEE ANGPDIWNTT WYPKASDHVN TDKPWFVVDA TDKILGRLAS 120
  121 TIANHIRGKN LASYTPSVDM GAFVIVVNAE KVAVSGKKRN QKLYRRHSGR PGGMTVETFD 180
  181 QLQQRIPERI VEHAVRGMLP KGRLGRALFN HLKVYKGPDH PHEAQKPLDL PIRDKRIQLQ 240
  241 K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [84..241] PSI-BLAST 55.0 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  10.0286073270483 bayes_pls_golite062009
  • structural molecule activity
    		•  9.45133141168812 bayes_pls_golite062009
  • binding
    		•  1.22159759850364 bayes_pls_golite062009
  • RNA binding
    		•  0.840527362301162 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.513360853458228 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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