YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RK13_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLCSSSTV ILSSSSVKSS GSERKSPFLG FSLTAISKPS VRVGIYANSK RGLQVKCEAE  60
   61 PTTTTSLVPA NQRWMFDEEE ANGPDIWNTT WYPKASDHVN TDKPWFVVDA TDKILGRLAS 120
  121 TIANHIRGKN LASYTPSVDM GAFVIVVNAE KVAVSGKKRN QKLYRRHSGR PGGMTVETFD 180
  181 QLQQRIPERI VEHAVRGMLP KGRLGRALFN HLKVYKGPDH PHEAQKPLDL PIRDKRIQLQ 240
  241 K

Type	Start	End	Confidence
Signal Peptide	1	19	0.95
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	241	0.99