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Protein Overview: BH107_ARATH

General Information:
Name(s) found: BH107_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9662996|emb|CAC00740.1| putative HLH DNA binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|75311122|sp|Q9LET0.1|BH107_ARATH RecName: Full=Putative transcription factor bHLH107; AltName: Full=Transcription factor EN 55; AltName: Full=bHLH transcription factor bHLH107; AltName: Full=Basic helix-loop-helix protein 107; Short=bHLH 107; Short=Atb [NCBI NR]
  • gi|15229004|ref|NP_191236.1| basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T51265 probable HLH DNA binding protein - Arabidopsis thaliana [NCBI NR]
  • Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1 [Swiss-Prot]
  • (Q9LET0) Putative HLH DNA binding protein [athaliana3702.FASTAC.txt]
  • putative HLH DNA binding protein [Arabidopsis thaliana]gi|11292134|pir||T51265 probable HLH DNA binding protein - Arabidopsis thalianagi|15229004|ref|NP_191236.1| basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Basic helix-loop-helix (bHLH) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | basic helix-loop-helix (bHLH) family protein | chr3:21040181-21041597 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative HLH DNA binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:21029202-21030618 REVERSE LENGTH=230 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 230 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: regulation of transcription [TAS]
    response to chitin [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPEVSDQIF YAFLTGGLCA SSTSTTVTSS SDPFATVYED KALASLRNHK EAERKRRARI  60
   61 NSHLNKLRKL LSCNSKTDKS TLLAKVVQRV KELKQQTLEI TDETIPSETD EISVLNIEDC 120
  121 SRGDDRRIIF KVSFCCEDRP ELLKDLMETL KSLQMETLFA DMTTVGGRTR NVLVVAADKE 180
  181 HHGVQSVNFL QNALKSLLER SSKSVMVGHG GGGGEERLKR RRALDHIIMV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] PSI-BLAST 9.30103 SREBP-1a
    2 View Details [125..230] FFAS03 2.07 ACT domain protein from Streptococcus pneumoniae

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.12507195426228 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.43204604575196 bayes_pls_golite062009
  • DNA binding
    		•  0.40884226851256 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.31759335140578 bayes_pls_golite062009
  • transcription factor activity
    		•  0.09721565916723 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.0923752113053079 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.44

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle