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Protein Overview: RH53_ARATH

General Information:
Name(s) found: RH53_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • DEAD-box ATP-dependent RNA helicase 53 OS=Arabidopsis thaliana GN=RH53 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 616 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    cell wall [IDA]
    protein complex [IDA]
    nucleolus [IDA]
    Biological Process: response to cold [IEP]
    Group II intron splicing [IMP]
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITTVLRRSL LDASKRNLSA SLTSINTVLF HNLAPAATRV SDLALIGSSD VKAGFPFGVE  60
   61 AKGIHFQSGP LDFRASMVSQ AGFAISESSE RRVGDSESVG GDGLAISELG ISPEIVKALS 120
  121 SKGIEKLFPI QKAVLEPAME GRDMIGRART GTGKTLAFGI PIIDKIIKYN AKHGRGRNPL 180
  181 CLVLAPTREL ARQVEKEFRE SAPSLDTICL YGGTPIGQQM RQLDYGVDVA VGTPGRVIDL 240
  241 MKRGALNLSE VQFVVLDEAD QMLQVGFAED VEIILEKLPE KRQSMMFSAT MPSWIRSLTK 300
  301 KYLNNPLTVD LVGDSDQKLA DGITTYSIIA DSYGRASIIG PLVTEHAKGG KCIVFTQTKR 360
  361 DADRLSYALA RSFKCEALHG DISQSQRERT LAGFRDGHFN ILVATDVAAR GLDVPNVDLI 420
  421 IHYELPNNTE TFVHRTGRTG RAGKKGSAIL IYSQDQSRAV KIIEREVGSR FTELPSIAVE 480
  481 RGSASMFEGI GSRSGGSFGG GMRDRGSSFG GRSGGGGYGG SSGGYGGGRS GGSSNRYSGD 540
  541 SDRSGFGSFG MRSPEGYGSD RSSQSGGRSS FGGGRSGGSS NNRSSGFGDF GSDRSSQSGG 600
  601 RSSFGGFGSN DGKRSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] deduced N/A No confident structure predictions are available.
    2 View Details [104..489] PSI-BLAST 95.30103 No description for 2i4iA was found.
    3 View Details [490..616] MSA 1.889996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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