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Protein Overview: gi|42563478, gi|...

General Information:
Name(s) found: gi|6223646 [NCBI NR]
gi|42563478 [NCBI NR]
gi|116325948 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|6223646|gb|AAF05860.1|AC011698_11 putative beta-1,3-glucanase [Arabidopsis thaliana] [NCBI NR]
  • gi|42563478|ref|NP_187051.3| glycosyl hydrolase family 17 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|116325948|gb|ABJ98575.1| At3g04010 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 491 amino acids

    Gene Ontology:
    Cellular Component: anchored to membrane [TAS]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYRRKQSAI TNSAVVFIII SAVCFLSGGV SGLGVNWGTM ASHQLPPKTV VEMLKDNNIQ  60
   61 KVKLFDADTN TMGALAGSGV EVMVAIPNDL LLAMGNYQRA KDWVQRNVSR FNFNNGVKIK 120
  121 YVAVGNEPFL TAYNGSFINL TYPALFNIQT ALNEAGVGDF TKATVPLNAD VYNSPPDNQV 180
  181 PSAGRFRSDI IQEMTQIVNF LAQNKAPFTV NIYPFLSLYL SSDFPFEYAF FDGQNTVNDN 240
  241 GVIYTNVFDA SFDTLLASLN ALNHGNMEVI VGEVGWPTDG DKNANVPNAE RFYSGLLPRL 300
  301 ANNVGTPMRK GYIEVYLFGF IDEDAKSVAP GNFERHWGIF KFDGQPKFPV DFRGQGQKKF 360
  361 LTGAQNVQYF LNQWCMFNPN GRGNMSRLGD NINYACSHSD CTALGYGSSC GNLDANGNAS 420
  421 YAFNMYFQVQ NQEAQACDFE GLATITTQNI SQGQCNFPIQ IGEPSSGHYD YSYGSMVRLC 480
  481 LVMSGLVFLL I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..357] PSI-BLAST 80.221849 Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome
    2 View Details [358..491] Pfam 39.920819 No description for PF07983.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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