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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42563478, gi|...
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYRRKQSAI TNSAVVFIII SAVCFLSGGV SGLGVNWGTM ASHQLPPKTV VEMLKDNNIQ  60
   61 KVKLFDADTN TMGALAGSGV EVMVAIPNDL LLAMGNYQRA KDWVQRNVSR FNFNNGVKIK 120
  121 YVAVGNEPFL TAYNGSFINL TYPALFNIQT ALNEAGVGDF TKATVPLNAD VYNSPPDNQV 180
  181 PSAGRFRSDI IQEMTQIVNF LAQNKAPFTV NIYPFLSLYL SSDFPFEYAF FDGQNTVNDN 240
  241 GVIYTNVFDA SFDTLLASLN ALNHGNMEVI VGEVGWPTDG DKNANVPNAE RFYSGLLPRL 300
  301 ANNVGTPMRK GYIEVYLFGF IDEDAKSVAP GNFERHWGIF KFDGQPKFPV DFRGQGQKKF 360
  361 LTGAQNVQYF LNQWCMFNPN GRGNMSRLGD NINYACSHSD CTALGYGSSC GNLDANGNAS 420
  421 YAFNMYFQVQ NQEAQACDFE GLATITTQNI SQGQCNFPIQ IGEPSSGHYD YSYGSMVRLC 480
  481 LVMSGLVFLL I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle