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Protein Overview: LAC1_ARATH

General Information:
Name(s) found: LAC1_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 581 amino acids

    Gene Ontology:
    Cellular Component: apoplast [IEA]
    endomembrane system [IEA]
    Biological Process: lignin catabolic process [IEA]
    oxidation reduction [IEA]
    Molecular Function: laccase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENLGFLIIS TFLLLFTTLL PYSSASTTRR FHFNVEWKKV TRLCHTKQLL TVNGQYPGPT  60
   61 VAVHEGDIVE IKVTNRIAHN TTIHWHGLRQ YRTGWADGPA YITQCPIRSK QSYTYRFKVE 120
  121 DQRGTLLWHA HHSWQRASVY GAFIIYPRQP YPFSGSHIQS EIPIILGEWW NDDVDNVEKA 180
  181 MMKTGAGAKV SDAYTLNGLP GPLYPCSTKD TFTATVDAGK TYILRIINAA LNNELFVAVA 240
  241 NHTLTVVEVD AVYTKPVHTK AIMIAPGQTT TLLLRADQLS GGEFLIAATP YVTSVFPFNN 300
  301 STTVGFIRYT GKTKPENSVN TRRRRRLTAM STVVALPNML DTKFATKFSD SIKSLGSAKY 360
  361 PCKVPTKIDK RVITTISLNL QDCPLNQTCD GYAGKRFFAS MNNISFVRPP ISILESYYKK 420
  421 QSKGVFSLDF PEKPPNRFDF TGVDPVSENM NTEFGTKLFE VEFGSRLEIV FQGTSFLNIE 480
  481 NHPLHVHGHN FFVVGRGFGN FDPEKDPKRY NLVDPPERNT FAVPTGGWAA IRINADNPGV 540
  541 WFIHCHLEQH TSWGLAMGFI VKDGPLPSQT LLPPPHDLPQ C

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..581] PSI-BLAST 91.522879 Ascorbate oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
    		•  4.08759434952417 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.01218347550477 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.94535655802043 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.6745480751389 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.65536020269373 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.17429358667283 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.63942316748862 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  1.51790376716885 bayes_pls_golite062009
  • transporter activity
    		•  1.20799429432885 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.14867039407339 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.09624639459552 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.85648428256869 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.761084719356529 bayes_pls_golite062009
  • copper ion binding
    		•  0.73440414441333 bayes_pls_golite062009
  • catalytic activity
    		•  0.733511559778369 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.61582564326478 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions, oxygen as acceptor
    		•  0.575651787344859 bayes_pls_golite062009
  • ferroxidase activity
    		•  0.575651787344859 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle