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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAC1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENLGFLIIS TFLLLFTTLL PYSSASTTRR FHFNVEWKKV TRLCHTKQLL TVNGQYPGPT  60
   61 VAVHEGDIVE IKVTNRIAHN TTIHWHGLRQ YRTGWADGPA YITQCPIRSK QSYTYRFKVE 120
  121 DQRGTLLWHA HHSWQRASVY GAFIIYPRQP YPFSGSHIQS EIPIILGEWW NDDVDNVEKA 180
  181 MMKTGAGAKV SDAYTLNGLP GPLYPCSTKD TFTATVDAGK TYILRIINAA LNNELFVAVA 240
  241 NHTLTVVEVD AVYTKPVHTK AIMIAPGQTT TLLLRADQLS GGEFLIAATP YVTSVFPFNN 300
  301 STTVGFIRYT GKTKPENSVN TRRRRRLTAM STVVALPNML DTKFATKFSD SIKSLGSAKY 360
  361 PCKVPTKIDK RVITTISLNL QDCPLNQTCD GYAGKRFFAS MNNISFVRPP ISILESYYKK 420
  421 QSKGVFSLDF PEKPPNRFDF TGVDPVSENM NTEFGTKLFE VEFGSRLEIV FQGTSFLNIE 480
  481 NHPLHVHGHN FFVVGRGFGN FDPEKDPKRY NLVDPPERNT FAVPTGGWAA IRINADNPGV 540
  541 WFIHCHLEQH TSWGLAMGFI VKDGPLPSQT LLPPPHDLPQ C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle