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Protein Overview: SRC2_ARATH

General Information:
Name(s) found: SRC2_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||G86222 hypothetical protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|22655398|gb|AAM98291.1| At1g09070/F7G19_6 [Arabidopsis thaliana] [NCBI NR]
  • gi|1922937|gb|AAB70401.1| Similar to Glycine SRC2 (gb|AB000130). ESTs gb|H76869,gb|T21700,gb|ATTS5089 come from this gene [Arabidopsis thaliana] [NCBI NR]
  • gi|18390977|ref|NP_563835.1| SRC2 (SOYBEAN GENE REGULATED BY COLD-2); protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|15010558|gb|AAK73938.1| At1g09070/F7G19_6 [Arabidopsis thaliana] [NCBI NR]
  • Protein SRC2 homolog OS=Arabidopsis thaliana GN=SRC2 PE=1 SV=1 [Swiss-Prot]
  • (O04023) F7G19.6 protein (At1g09070/F7G19_6) [athaliana3702.FASTAC.txt]
  • At1g09070/F7G19_6 [Arabidopsis thaliana]gi|15010558|gb|AAK73938.1| At1g09070/F7G19_6 [Arabidopsis thaliana]gi|25402513|pir||G86222 hypothetical protein [imported] - Arabidopsis thalianagi|1922937|gb|AAB70401.1| Similar to Glycine SRC2 (gb|AB000130). ES [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 C2 domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SRC2, (AT)SRC2 | (AT)SRC2/SRC2 (SOYBEAN GENE REGULATED BY COLD-2); protein binding | chr1:2927770-2928744 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • rhodopsin-like receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Similar to Glycine SRC2 (gb|AB000130). ESTs gb|H76869,gb|T21700,gb|ATTS5089 come from this gene. [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g09070/F7G19_6 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SRC2, (AT)SRC2 | soybean gene regulated by cold-2 | chr1:2927767-2928741 FORWARD LENGTH=324 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g09070/F7G19_6 OS=Arabidopsis thaliana GN=F7G19.6 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 324 amino acids

    Gene Ontology:
    Cellular Component: protein storage vacuole [IDA]
    endoplasmic reticulum [IDA]
    Biological Process: protein targeting to vacuole [TAS]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MECRSLDLTI ISAEDLKDVQ LIGKQDLYAV VSINGDARTK QKTKVDKDCG TKPKWKHQMK  60
   61 LTVDDAAARD NRLTLVFEIV ADRPIAGDKP VGEVSVPVKE LLDQNKGDEE KTVTYAVRLP 120
  121 NGKAKGSLKF SFKFGEKYTY GSSSGPHAPV PSAMDHKTMD QPVTAYPPGH GAPSAYPAPP 180
  181 AGPSSGYPPQ GHDDKHDGVY GYPQQAGYPA GTGGYPPPGA YPQQGGYPGY PPQQQGGYPG 240
  241 YPPQGPYGYP QQGYPPQGPY GYPQQQAHGK PQKPKKHGKA GAGMGLGLGL GAGLLGGLLV 300
  301 GEAVSDIADM GDMGDMGDMG GFDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] PSI-BLAST 31.39794 Synaptogamin I
    2 View Details [157..324] PSI-BLAST 6.30103 Sec24


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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