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Protein Overview: gi|7267482, gi|5...

General Information:
Name(s) found: gi|7484958 [NCBI NR]
gi|7267482 [NCBI NR]
gi|5731762 [NCBI NR]
gi|15236488 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||T14195 extensin homolog T28D5.100 - Arabidopsis thaliana [NCBI NR]
  • gi|7267482|emb|CAB77966.1| extensin-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|5731762|emb|CAB52563.1| extensin-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15236488|ref|NP_192581.1| proline-rich extensin-like family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 707 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: plant-type cell wall organization [IEA]
    Molecular Function: structural constituent of cell wall [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMIKYNIKP KQRKKIVAMG VIRTSRTMGL GQCMVYVVVL SAIAATVTSY PYTSPQTPHY  60
   61 NSPSHEHKIP KYTPHPKPSI YSSSPPPSYY SPSPKVDYKS PPPSYVYSSP PPPYYSPSPK 120
  121 VDYKSLPPPY VYSSPPPPYY SPSPKVNYKS PPPPYVYSSP PPPYYSPSPK GDYKSPPPPY 180
  181 VYSSPPPPYY SPSPKVDYKS PPPPYVYSSP PPPYYSPTPK VDYKSPPPPY VYSSPPPPYY 240
  241 SPSPKVDYKS PPPPYVYSSP PPPYYSPSPK VNYKSPPPPY VYGSPPPPYY SPSPKVDYKS 300
  301 PPPPYVYSSP PPPYYSPSPK VNYKSPPPPY VYGSPPPPYY SPSPKVDYKS PPPPYVYSSP 360
  361 PPPYYSPSPK VDYKSPPPPY VYSSTPPPYY SPSPKVDYKS PPPPYVYSSP PPPYYSPSPK 420
  421 VDYKSPPPPY IYSSTPLPYY SPSPKVDYKS PPPPYVYSSP PPPYYSPSPK VDYKPPPPPY 480
  481 VYSSPPPPYY SPSPKVDYKS PPPPYVYSFP PPPYYSPSPK VDYKSPPPPY VYSSPPPPYY 540
  541 SPSPKVNYKS PPPPYVYSSP PPPYYSPSPK VEYKSPPPPY IYSSPPPPYY APSPKVDYKS 600
  601 PPPPYVYSSP PPPYYSPSPK VDYKSPPPPY VYSSPPPPYY SPSPKVNYKS PPPPYVYSSP 660
  661 PPPYYSPSPK VDYKSSPPQY VYSSPPTPYY SPSPKVTYKS PPPPYVY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] MSA 1.017995 View MSA. No confident structure predictions are available.
    2 View Details [68..280] deduced N/A No confident structure predictions are available.
    3 View Details [281..406] MSA 1.026992 View MSA. No confident structure predictions are available.
    4 View Details [407..623] deduced N/A No confident structure predictions are available.
    5 View Details [624..707] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle