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View Structure Prediction Details

Protein: gi|7267482, gi|5...
Organism: Arabidopsis thaliana
Length: 707 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7267482, gi|5....

Description E-value Query
Range
Subject
Range
gi|37930527, gi|... - gi|37930527|gb|AAP74661.1| elicitor-like transglutaminase M81 [Phytophthora infestans], gi|23505399|...
373.0 [0..4] [705..670]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMIKYNIKP KQRKKIVAMG VIRTSRTMGL GQCMVYVVVL SAIAATVTSY PYTSPQTPHY  60
   61 NSPSHEH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KIPKYTPHPK PSIYSSSPPP SYYSPSPKVD YKSPPPSYVY SSPPPPYYSP SPKVDYKSLP  60
   61 PPYVYSSPPP PYYSPSPKVN YKSPPPPYVY SSPPPPYYSP SPKGDYKSPP PPYVYSSPPP 120
  121 PYYSPSPKVD YKSPPPPYVY SSPPPPYYSP TPKVDYKSPP PPYVYSSPPP PYYSPSPKVD 180
  181 YKSPPPPYVY SSPPPPYYSP SPKVNYKSPP PPY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [281-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VYGSPPPPYY SPSPKVDYKS PPPPYVYSSP PPPYYSPSPK VNYKSPPPPY VYGSPPPPYY  60
   61 SPSPKVDYKS PPPPYVYSSP PPPYYSPSPK VDYKSPPPPY VYSSTPPPYY SPSPKVDYKS 120
  121 PPPPYV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [407-623]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YSSPPPPYYS PSPKVDYKSP PPPYIYSSTP LPYYSPSPKV DYKSPPPPYV YSSPPPPYYS  60
   61 PSPKVDYKPP PPPYVYSSPP PPYYSPSPKV DYKSPPPPYV YSFPPPPYYS PSPKVDYKSP 120
  121 PPPYVYSSPP PPYYSPSPKV NYKSPPPPYV YSSPPPPYYS PSPKVEYKSP PPPYIYSSPP 180
  181 PPYYAPSPKV DYKSPPPPYV YSSPPPPYYS PSPKVDY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [624-707]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSPPPPYVYS SPPPPYYSPS PKVNYKSPPP PYVYSSPPPP YYSPSPKVDY KSSPPQYVYS  60
   61 SPPTPYYSPS PKVTYKSPPP PYVY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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