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Protein Overview: gi|15241118, gi|...

General Information:
Name(s) found: gi|9758626 [NCBI NR]
gi|15241118 [NCBI NR]
Description(s) found:
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  • gi|9758626|dbj|BAB09288.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|15241118|ref|NP_200417.1| ATP binding / nucleotide binding / phenylalanine-tRNA ligase [Arabidopsis thaliana] [NCBI NR]
  • (Q9FKU1) Genomic DNA, chromosome 5, P1 clone:MDA7 [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15241118|ref|NP_200417.1| hypothetical protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ATP binding / nucleotide binding / phenylalanine-tRNA ligase | chr5:22721234-22722118 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Domain of unknown function (DUF2431) | chr5:22704008-22704892 FORWARD LENGTH=220 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Uncharacterized protein OS=Arabidopsis thaliana GN=At5g56060 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 220 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: phenylalanyl-tRNA aminoacylation [IEA]
    translation [IEA]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    phenylalanine-tRNA ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFMGTINLQ QYSNKQKILL VGEGDFSFSL SLARVFGSAT NITATSLDTR EELGIKYTDG  60
   61 KANVEGLELF GCTVVHGVNV HSMSSDYRLG RYDRIIFNFP HSGLGFGSEH DIFFIMLHQG 120
  121 LVRGFLESAR KMLKDEDGEI HVTHKTTDPF NRWGIETLAG EKGLRLIGEI EFHKWAFPGY 180
  181 SNKKGGGSNC NSTFLLRRIL SLLDYHVYSS VYSFRIYMII

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..220] FFAS03 2.43 No description for 2fcaA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.639646908254091 bayes_pls_golite062009
  • transferase activity
    		•  0.394707018913607 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.0810339077201343 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.0737551340470768 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle