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Protein Overview: UBP17_ARATH

General Information:
Name(s) found: UBP17_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9759625|dbj|BAB11567.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|75262625|sp|Q9FKP5.1|UBP17_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17; AltName: Full=Ubiquitin thioesterase 17; AltName: Full=Ubiquitin-specific-processing protease 17; AltName: Full=Deubiquitinating enzyme 17; Short=AtUBP17 [NCBI NR]
  • gi|15238468|ref|NP_201348.1| UBP17 (UBIQUITIN-SPECIFIC PROTEASE 17); cysteine-type endopeptidase/ ubiquitin thiolesterase/ zinc ion binding [Arabidopsis thaliana] [NCBI NR]
  • Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana GN=UBP17 PE=2 SV=1 [Swiss-Prot]
  • (Q9FKP5) Similarity to ubiquitin carboxyl-terminal hydrolase [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15238468|ref|NP_201348.1| ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ubiquitin carboxyl-terminal hydrolase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein | chr5:26175089-26178322 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • cysteine-type endopeptidase/ ubiquitin thiolesterase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: UBP17 | ubiquitin-specific protease 17 | chr5:26157863-26161096 FORWARD LENGTH=731 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 731 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IEA]
    Biological Process: ubiquitin-dependent protein catabolic process [IEA][ISS]
    Molecular Function: zinc ion binding [IEA]
    cysteine-type endopeptidase activity [ISS]
    ubiquitin thiolesterase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLVFLLIRR QWRSASVRRE EVIRLIALAT EESYLAEEVR PATVDYGGDS VSDVYRCAVC  60
   61 LYPTTTRCSQ CKSVRYCSSK CQILHWRRGH KEECRSPDYD EEKEEYVQSD YDAKESNVDF 120
  121 PSRGTAYESS SNVSVDVACD MSTSRPSIHK VQPRSEAVDF TTSLNIKDNL YETRPLSRKK 180
  181 SRNRTDKVES ASNYSKGKTD AKLRKLGNQN SRRSGDSANM SISDQFLSVG FEEEMNALKH 240
  241 ERITSEPSSA SAAMSSSSTL LLPSKANSKP KVSQASSSGL KTSVQKVVQH FRPPQSSKKS 300
  301 QPSSSIDEMS FSYELFVKLY CDRVELQPFG LVNLGNSCYA NAVLQCLAFT RPLISYLIRG 360
  361 LHSKTCRKKS WCFVCEFEHL ILKARGGESP LSPIKILSKL QKIGKHLGPG KEEDAHEFLR 420
  421 CAVDTMQSVF LKEAPAAGPF AEETTLVGLT FGGYLHSKIK CMACLHKSER PELMMDLTVE 480
  481 IDGDIGSLEE ALAQFTAYEV LDGENRYFCG RCKSYQKAKK KLMILEGPNI LTVVLKRFQS 540
  541 DNFGKLSKPI HFPELLDISP YMSDPNHGDH PVYSLYAVVV HLDAMSTLFS GHYVCYIKTL 600
  601 DGDWFKIDDS NVFPVQLETV LLEGAYMLLY ARDSPRPVSK NGGRKSKQRR NLAAIPSRKG 660
  661 NKKQRDGDNN SLLPRVDWSS GSLSSMFSSS DTTSSCSTKD SSGIENLSDY LFGGVEPVWK 720
  721 WDRHNKSQTF D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] PSI-BLAST 4.0 No description for 2oddA was found.
    2 View Details [102..731] PSI-BLAST 55.0 Crystal structure of HAUSP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle