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Protein Overview: gi|15218843, gi|...

General Information:
Name(s) found: gi|6227016 [NCBI NR]
gi|25404568 [NCBI NR]
gi|15218843 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|6227016|gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana [NCBI NR]
  • pir||D96683 hypothetical protein F12P19.8 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15218843|ref|NP_176766.1| anac028 (Arabidopsis NAC domain containing protein 28); transcription factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 631 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: multicellular organismal development [ISS]
    regulation of transcription [IEA]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK  60
   61 DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS HSRMVGTKKT LVYYRGRAPH 120
  121 GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE 180
  181 QSTSSTCLYS DGMYENLENS GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN 240
  241 FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML 300
  301 SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK 360
  361 EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN DNQEQEHHDQ DGMDVNNNNG 420
  421 DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI 480
  481 VPSQTVIVYI NPTDGNECCH SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP 540
  541 MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD 600
  601 EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] PSI-BLAST 67.69897 Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
    2 View Details [164..322] deduced N/A No confident structure predictions are available.
    3 View Details [323..450] MSA 3.121996 View MSA. No confident structure predictions are available.
    4 View Details [451..631] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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