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View Structure Prediction Details

Protein: gi|15218843, gi|...
Organism: Arabidopsis thaliana
Length: 631 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15218843, gi|....

Description E-value Query
Range
Subject
Range
gi|255674164, gi... - gi|34902214|ref|NP_912453.1| Hypothetical protein [Oryza sativa (japonica cultivar-group)], gi|27452...
426.0 [0..1] [519..1]
NAC86_ARATH - NAC domain-containing protein 86 OS=Arabidopsis thaliana GN=NAC086 PE=2 SV=1
360.0 [0..1] [497..1]
gi|21358787 - gi|21358787|gb|AAM47025.1| nam-like protein 1 [Petunia x hybrida]
317.0 [0..5] [525..26]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK  60
   61 DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS HSRMVGTKKT LVYYRGRAPH 120
  121 GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.69897
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [164-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEQHHGTKKN KGTTNSEQST SSTCLYSDGM YENLENSGYP VSPETGGLTQ LGNNSSSDME  60
   61 TIENKWSQFM SHDTSFNFPP QSQYGTISYP PSKVDIALEC ARLQNRMLPP VPPLYVEGLT 120
  121 HNEYFGNNVA NDTDEMLSKI IALAQASHEP RNSLDSWDG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [323-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSASGNFHGD FNYSGEKVSC LEANVEAVDM QEHHVNFKEE RLVENLRWVG VSSKELEKSF  60
   61 VEEHSTVIPI EDIWRYHNDN QEQEHHDQDG MDVNNNNGDV DDAFTLEFSE NEHNENLLDK 120
  121 NDHETTSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [451-631]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH SMTSKEEVHV  60
   61 RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD 120
  121 CNNRGTILMM ENAVVRRKIW KKKKEKNMVD EQGFRFQDSF VLKKLGLSLA IILAVSTISL 180
  181 I

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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