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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15218843, gi|...
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK  60
   61 DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS HSRMVGTKKT LVYYRGRAPH 120
  121 GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE 180
  181 QSTSSTCLYS DGMYENLENS GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN 240
  241 FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML 300
  301 SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK 360
  361 EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN DNQEQEHHDQ DGMDVNNNNG 420
  421 DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI 480
  481 VPSQTVIVYI NPTDGNECCH SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP 540
  541 MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD 600
  601 EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle