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Protein Overview: gi|18394085, gi|...

General Information:
Name(s) found: gi|5080798 [NCBI NR]
gi|25289284 [NCBI NR]
gi|18394085 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|5080798|gb|AAD39308.1|AC007576_31 Very similar to ribonucleases [Arabidopsis thaliana] [NCBI NR]
  • pir||B86276 hypothetical protein F7A19.32 - Arabidopsis thaliana [NCBI NR]
  • gi|18394085|ref|NP_563941.1| ribonuclease T2 family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 228 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [IEA]
    endoribonuclease activity [ISS]
    ribonuclease T2 activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF  60
   61 GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW PTLSCPSNEG FNFWEHEWEK 120
  121 HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP 180
  181 GIECNKDPER NAQLHQIYIC VDTSGTEFIE CPVLPRGSCP SQIQFSKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..228] PSI-BLAST 66.39794 Crystal Structure of the Nicotiana glutinosa Ribonuclease NW


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle