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View Structure Prediction Details

Protein: gi|18394085, gi|...
Organism: Arabidopsis thaliana
Length: 228 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18394085, gi|....

Description E-value Query
Range
Subject
Range
gi|532754 - gi|532754|gb|AAA21135.1| RNase NE [Nicotiana alata]
269.0 [0..1] [228..3]

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Predicted Domain #1
Region A:
Residues: [1-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAKGCVNVL LKLLVFQGLF VSRPQEDFDF FYFVLQWPGA YCDTSRACCY PTSGKPAADF  60
   61 GIHGLWPNYN GGSWPSNCDP DSQFDRSQIS DLVSSLKKNW PTLSCPSNEG FNFWEHEWEK 120
  121 HGTCSESVMD QHEYFENALK LKQKANLLQI LKNSGINPDD GFYNLDKITN AIKDGIGFTP 180
  181 GIECNKDPER NAQLHQIYIC VDTSGTEFIE CPVLPRGSCP SQIQFSKF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.39794
Match: 1iybA
Description: Crystal Structure of the Nicotiana glutinosa Ribonuclease NW
Matching Structure (courtesy of the PDB):

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Created and Maintained by: Michael Riffle