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Protein Overview: LPA1_ARATH

General Information:
Name(s) found: LPA1_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana GN=LPA1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 453 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: photosystem II oxygen evolving complex assembly [IMP]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVATAPSLN RHFPRRISNL YSRVKQRRPW LPPGDATLFN SRRNWDSHLF VYASSSSSPS  60
   61 SSPPSPNSPT DDLTAELCVN TGLDLFKRGR VKDALVQFET ALSLAPNPIE SQAAYYNKAC 120
  121 CHAYRGEGKK AVDCLRIALR DYNLKFATIL NDPDLASFRA LPEFKELQEE ARLGGEDIGD 180
  181 NFRRDLKLIS EVRAPFRGVR KFFYFAFAAA AGISMFFTVP RLVQAIRGGD GAPNLLETTG 240
  241 NAAINIGGIV VMVSLFLWEN KKEEEQMVQI TRDETLSRLP LRLSTNRVVE LVQLRDTVRP 300
  301 VILAGKKETV TLAMQKADRF RTELLRRGVL LVPVVWGERK TPEIEKKGFG ASSKAATSLP 360
  361 SIGEDFDTRA QSVVAQSKLK GEIRFKAETV SPGEWERWIR DQQISEGVNP GDDVYIILRL 420
  421 DGRVRRSGRG MPDWAEISKE LPPMDDVLSK LER

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..453] PSI-BLAST 26.522879 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.02652482814057 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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