| Protein: | LPA1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 453 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LPA1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
195.0 | [0..11] | [408..303] |
|
Region A: Residues: [1-453] |
1 11 21 31 41 51
| | | | | |
1 MAVATAPSLN RHFPRRISNL YSRVKQRRPW LPPGDATLFN SRRNWDSHLF VYASSSSSPS 60
61 SSPPSPNSPT DDLTAELCVN TGLDLFKRGR VKDALVQFET ALSLAPNPIE SQAAYYNKAC 120
121 CHAYRGEGKK AVDCLRIALR DYNLKFATIL NDPDLASFRA LPEFKELQEE ARLGGEDIGD 180
181 NFRRDLKLIS EVRAPFRGVR KFFYFAFAAA AGISMFFTVP RLVQAIRGGD GAPNLLETTG 240
241 NAAINIGGIV VMVSLFLWEN KKEEEQMVQI TRDETLSRLP LRLSTNRVVE LVQLRDTVRP 300
301 VILAGKKETV TLAMQKADRF RTELLRRGVL LVPVVWGERK TPEIEKKGFG ASSKAATSLP 360
361 SIGEDFDTRA QSVVAQSKLK GEIRFKAETV SPGEWERWIR DQQISEGVNP GDDVYIILRL 420
421 DGRVRRSGRG MPDWAEISKE LPPMDDVLSK LER
|
| Detection Method: |  |
| Confidence: | 26.522879 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.02652482814057 | bayes_pls_golite062009 |
