YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|7270786, gi|1...

General Information:
Name(s) found: gi|7485845 [NCBI NR]
gi|7270786 [NCBI NR]
gi|4467109 [NCBI NR]
gi|15233648 [NCBI NR]
Description(s) found:
Found 9 descriptions.
SHOW ALL
  • pir||T05630 hypothetical protein F20D10.150 - Arabidopsis thaliana [NCBI NR]
  • gi|7270786|emb|CAB80468.1| LG127/30 like gene [Arabidopsis thaliana] [NCBI NR]
  • gi|4467109|emb|CAB37543.1| LG127/30 like gene [Arabidopsis thaliana] [NCBI NR]
  • gi|15233648|ref|NP_195516.1| lyase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 649 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: lyase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSQKKIASL FICFLLLLLL PLSFSKPTRN LDGISARAPT VQQIRSRHHG TREVIVDNGI  60
   61 IRVSFSNPQG LITGIKYKGI DNVLHPHLRD RGIEGTNFRI ITQTQEQVEI SFSRTWEDGH 120
  121 IPLNVDKRYI IRRNTSGIYM YGIFERLPEW PELDMGLIRI AFKLNPERFH YMAVADNRQR 180
  181 EMPTEDDRDI KRGHAKALGY KEAVQLTHPH NSMFKNQVDD KYQYTCEIKD NKVHGWISTK 240
  241 SRVGFWIISP SGEYRSGGPI KQELTSHVGP TAITTFISGH YVGADMEAHY RPGEAWKKVL 300
  301 GPVFIYLNSD STSNNKPQDL LWEDAKQQSE KEVKAWPYDF VASSDYLSRR ERGSVTGRLL 360
  361 VNDRFLTPGK SAYVGLAPPG EAGSWQTNTK GYQFWTKTNE TGYFTIENVR PGTYNLYGWV 420
  421 PGFIGDFRYQ NLVNVAAGSV ISLGRVVYKP PRNGPTLWEI GVPDRTAREY FIPEPYKDTM 480
  481 NPLYLNHTDK FRQYGLWQRY TELYPTHDLV YTVGVSNYSQ DWFYAQVTRK TGDLTYVPTI 540
  541 WQIVFHLPYV NSRGSYTLQV ALASAAWANL QVRINNQNSW PFFSTGTIGK DNAIARHGIH 600
  601 GMYRLYTIDV PGRLLRTGTN TIYLRQPKAQ GPFEGLMYDY IRLEEPSRA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..649] PSI-BLAST 140.0 Rhamnogalacturonan lyase from Aspergillus aculeatus

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.24087518312023 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle