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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7270786, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSQKKIASL FICFLLLLLL PLSFSKPTRN LDGISARAPT VQQIRSRHHG TREVIVDNGI  60
   61 IRVSFSNPQG LITGIKYKGI DNVLHPHLRD RGIEGTNFRI ITQTQEQVEI SFSRTWEDGH 120
  121 IPLNVDKRYI IRRNTSGIYM YGIFERLPEW PELDMGLIRI AFKLNPERFH YMAVADNRQR 180
  181 EMPTEDDRDI KRGHAKALGY KEAVQLTHPH NSMFKNQVDD KYQYTCEIKD NKVHGWISTK 240
  241 SRVGFWIISP SGEYRSGGPI KQELTSHVGP TAITTFISGH YVGADMEAHY RPGEAWKKVL 300
  301 GPVFIYLNSD STSNNKPQDL LWEDAKQQSE KEVKAWPYDF VASSDYLSRR ERGSVTGRLL 360
  361 VNDRFLTPGK SAYVGLAPPG EAGSWQTNTK GYQFWTKTNE TGYFTIENVR PGTYNLYGWV 420
  421 PGFIGDFRYQ NLVNVAAGSV ISLGRVVYKP PRNGPTLWEI GVPDRTAREY FIPEPYKDTM 480
  481 NPLYLNHTDK FRQYGLWQRY TELYPTHDLV YTVGVSNYSQ DWFYAQVTRK TGDLTYVPTI 540
  541 WQIVFHLPYV NSRGSYTLQV ALASAAWANL QVRINNQNSW PFFSTGTIGK DNAIARHGIH 600
  601 GMYRLYTIDV PGRLLRTGTN TIYLRQPKAQ GPFEGLMYDY IRLEEPSRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle