






| Protein: | gi|7270786, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 649 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7270786, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
830.0 | [0..16] | [649..6] |
|
Region A: Residues: [1-649] |
1 11 21 31 41 51
| | | | | |
1 MVSQKKIASL FICFLLLLLL PLSFSKPTRN LDGISARAPT VQQIRSRHHG TREVIVDNGI 60
61 IRVSFSNPQG LITGIKYKGI DNVLHPHLRD RGIEGTNFRI ITQTQEQVEI SFSRTWEDGH 120
121 IPLNVDKRYI IRRNTSGIYM YGIFERLPEW PELDMGLIRI AFKLNPERFH YMAVADNRQR 180
181 EMPTEDDRDI KRGHAKALGY KEAVQLTHPH NSMFKNQVDD KYQYTCEIKD NKVHGWISTK 240
241 SRVGFWIISP SGEYRSGGPI KQELTSHVGP TAITTFISGH YVGADMEAHY RPGEAWKKVL 300
301 GPVFIYLNSD STSNNKPQDL LWEDAKQQSE KEVKAWPYDF VASSDYLSRR ERGSVTGRLL 360
361 VNDRFLTPGK SAYVGLAPPG EAGSWQTNTK GYQFWTKTNE TGYFTIENVR PGTYNLYGWV 420
421 PGFIGDFRYQ NLVNVAAGSV ISLGRVVYKP PRNGPTLWEI GVPDRTAREY FIPEPYKDTM 480
481 NPLYLNHTDK FRQYGLWQRY TELYPTHDLV YTVGVSNYSQ DWFYAQVTRK TGDLTYVPTI 540
541 WQIVFHLPYV NSRGSYTLQV ALASAAWANL QVRINNQNSW PFFSTGTIGK DNAIARHGIH 600
601 GMYRLYTIDV PGRLLRTGTN TIYLRQPKAQ GPFEGLMYDY IRLEEPSRA
|
| Detection Method: | |
| Confidence: | 140.0 |
| Match: | 1nkgA |
| Description: | Rhamnogalacturonan lyase from Aspergillus aculeatus |
Matching Structure (courtesy of the PDB):![]() |
|
| Term | Confidence | Notes |
| catalytic activity | 0.24087518312023 | bayes_pls_golite062009 |