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Protein Overview: ABI5_ARATH

General Information:
Name(s) found: ABI5_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: response to gibberellin stimulus [IEP]
    negative regulation of seed germination [IMP]
    response to abscisic acid stimulus [IEP][IMP]
    positive regulation of gene-specific transcription [IDA]
    response to salt stress [IEP]
    sugar mediated signaling pathway [TAS]
    regulation of transcription, DNA-dependent [TAS]
    seed development [IMP]
    response to chitin [IEP]
    seed germination [IEP]
    response to stress [TAS]
    response to water deprivation [IEP]
    Molecular Function: DNA binding [IDA]
    transcription factor activity [ISS][TAS]
    transcription activator activity [IDA][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK  60
   61 NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH NGFNNNNNNG GEGGVGVFSG 120
  121 GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS 180
  181 SSSNGQNNAQ NGGETAARQP TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI 240
  241 PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF 300
  301 GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR 360
  361 RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA LAELERKRKQ QYFESLKSRA 420
  421 QPKLPKSNGR LRTLMRNPSC PL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] deduced N/A No confident structure predictions are available.
    2 View Details [111..350] PSI-BLAST 3.39794 Sec24
    3 View Details [351..442] PSI-BLAST 3.69897 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle