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Protein Overview: RAP27_ARATH

General Information:
Name(s) found: RAP27_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Ethylene-responsive transcription factor RAP2-7 OS=Arabidopsis thaliana GN=RAP2-7 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 449 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IC]
    Biological Process: regulation of transcription, DNA-dependent [TAS]
    vegetative to reproductive phase transition of meristem [IMP]
    organ morphogenesis [IMP]
    Molecular Function: DNA binding [TAS]
    transcription factor activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF  60
   61 TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR DVEGSSSSRN WIDLSFDRIG 120
  121 DGETKLVTPV PTPAPVPAQV KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG 180
  181 GFDTAHAAAR AYDRAAIKFR GVDADINFTL GDYEEDMKQV QNLSKEEFVH ILRRQSTGFS 240
  241 RGSSKYRGVT LHKCGRWEAR MGQFLGKKAY DKAAINTNGR EAVTNFEMSS YQNEINSESN 300
  301 NSEIDLNLGI SLSTGNAPKQ NGRLFHFPSN TYETQRGVSL RIDNEYMGKP VNTPLPYGSS 360
  361 DHRLYWNGAC PSYNNPAEGR ATEKRSEAEG MMSNWGWQRP GQTSAVRPQP PGPQPPPLFS 420
  421 VAAASSGFSH FRPQPPNDNA TRGYFYPHP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] deduced N/A No confident structure predictions are available.
    2 View Details [128..232] PSI-BLAST 22.522879 GCC-box binding domain
    3 View Details [233..303] FFAS03 2.44 SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
    4 View Details [304..449] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle