| Protein: | RAP27_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 449 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAP27_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
323.0 | [0..47] | [449..1] |
|
|
253.0 | [0..37] | [449..12] |
|
|
250.0 | [0..1] | [448..1] |
|
|
240.0 | [0..16] | [446..68] |
|
|
240.0 | [0..1] | [446..1] |
|
|
238.0 | [0..1] | [445..1] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MLDLNLNADS PESTQYGGDS YLDRQTSDNS AGNRVEESGT STSSVINADG DEDSCSTRAF 60
61 TLSFDILKVG SSSGGDESPA ASASVTKEFF PVSGDCGHLR DVEGSSSSRN WIDLSFDRIG 120
121 DGETKLV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [128-232] |
1 11 21 31 41 51
| | | | | |
1 TPVPTPAPVP AQVKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAHA 60
61 AARAYDRAAI KFRGVDADIN FTLGDYEEDM KQVQNLSKEE FVHIL
|
| Detection Method: | |
| Confidence: | 22.522879 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [233-303] |
1 11 21 31 41 51
| | | | | |
1 RRQSTGFSRG SSKYRGVTLH KCGRWEARMG QFLGKKAYDK AAINTNGREA VTNFEMSSYQ 60
61 NEINSESNNS E
|
| Detection Method: | |
| Confidence: | 2.44 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [304-449] |
1 11 21 31 41 51
| | | | | |
1 IDLNLGISLS TGNAPKQNGR LFHFPSNTYE TQRGVSLRID NEYMGKPVNT PLPYGSSDHR 60
61 LYWNGACPSY NNPAEGRATE KRSEAEGMMS NWGWQRPGQT SAVRPQPPGP QPPPLFSVAA 120
121 ASSGFSHFRP QPPNDNATRG YFYPHP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
