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Protein Overview: gi|15241034, gi|...

General Information:
Name(s) found: gi|7327827 [NCBI NR]
gi|15241034 [NCBI NR]
gi|11358698 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|7327827|emb|CAB82284.1| putative transporter protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15241034|ref|NP_195788.1| ATCHX26; monovalent cation:proton antiporter/ sodium:hydrogen antiporter [Arabidopsis thaliana] [NCBI NR]
  • pir||T48189 probable transporter protein - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 780 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Biological Process: cation transport [IC]
    Molecular Function: sodium:hydrogen antiporter activity [ISS]
    monovalent cation:hydrogen antiporter activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNSVTSNGT HEFVCEAWLG SSSGGLLRGD DPLKYSTPLL LLLISLVSSL SSVFQALLRP  60
   61 LANVDFVTQI LAGIFLGPSA LGQNIDLVKK LFNTRSYFII ESFEAISFMF ISYISTAQVD 120
  121 MGVIKRGGKL AIINGLSLFL FPYVVGAIAC TVITSNIRGT VAKNNPEQLH NLLTNQSVVY 180
  181 FQVAYSVLSN LKMLNSEPGR LALSSIMVAN CFGWGFFLLL ITFDSFLHQN YSKTTYLPTF 240
  241 TKVLLLVGIV VVCRPIFNWI VKRTPEGKKL KASHLCTICV MLCTATFLSE TVGFPYVVGS 300
  301 VALGLVTPKT PPFGTGLTDK IGSFCYAVLM PCYVIGIGNK VDFFSFNLRD IISLEFLIFT 360
  361 ISAAKFASIV LPSLYFQVPI SHAVIVGFIV CIQGIYDVQI FKQLLNYKNI SHEAFGIMVI 420
  421 SAMVHSTIFT AIVKNLYGWV QRKHITYRRQ TVQHYEPNKP LKILTCFYHR ETVPPILTVL 480
  481 ELSTCPSSAS SHSIVSVNLE ELEQNNVPLL IQHHPGHNDE SSTSSSRRDQ ISKAFEKFRS 540
  541 GHDLQENVSV ECFTAVAPSK TMHEDVCALA FEKETDLIIF GMADGTAAER RLCRNVRNAS 600
  601 PSSVAVLMDQ GRLPDFKNMG TAMKNGSMRI NICSIFLGGA DDRETLAFAV RMTNQPYVNL 660
  661 TVLKLVDGEN VSHLNDVVEK RLDFRTIEKF RQDTMNKHNV ALREEASDLV NLLREEGNNY 720
  721 DLIMVGIRHE KSFEVLQGLS VWSEIEELGE IGDLLVSRDL KLSASVLAVQ QQLSSVVEEV 780
  781

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] deduced N/A No confident structure predictions are available.
    2 View Details [93..457] PSI-BLAST 13.0 Crystal structure of the Na+/H+ antiporter NhaA
    3 View Details [458..627] PSI-BLAST 7.69897 Potassium channel-related protein MthK
    4 View Details [628..780] FFAS03 1.17 Crystal structure of a probable ATP binding protein from thermus themophilus HB8

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  1.26736023026862 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.68812524232244 bayes_pls_golite062009
    4
    Term Confidence Notes
  • catalytic activity
    		•  0.257625842690978 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle