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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15241034, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNSVTSNGT HEFVCEAWLG SSSGGLLRGD DPLKYSTPLL LLLISLVSSL SSVFQALLRP  60
   61 LANVDFVTQI LAGIFLGPSA LGQNIDLVKK LFNTRSYFII ESFEAISFMF ISYISTAQVD 120
  121 MGVIKRGGKL AIINGLSLFL FPYVVGAIAC TVITSNIRGT VAKNNPEQLH NLLTNQSVVY 180
  181 FQVAYSVLSN LKMLNSEPGR LALSSIMVAN CFGWGFFLLL ITFDSFLHQN YSKTTYLPTF 240
  241 TKVLLLVGIV VVCRPIFNWI VKRTPEGKKL KASHLCTICV MLCTATFLSE TVGFPYVVGS 300
  301 VALGLVTPKT PPFGTGLTDK IGSFCYAVLM PCYVIGIGNK VDFFSFNLRD IISLEFLIFT 360
  361 ISAAKFASIV LPSLYFQVPI SHAVIVGFIV CIQGIYDVQI FKQLLNYKNI SHEAFGIMVI 420
  421 SAMVHSTIFT AIVKNLYGWV QRKHITYRRQ TVQHYEPNKP LKILTCFYHR ETVPPILTVL 480
  481 ELSTCPSSAS SHSIVSVNLE ELEQNNVPLL IQHHPGHNDE SSTSSSRRDQ ISKAFEKFRS 540
  541 GHDLQENVSV ECFTAVAPSK TMHEDVCALA FEKETDLIIF GMADGTAAER RLCRNVRNAS 600
  601 PSSVAVLMDQ GRLPDFKNMG TAMKNGSMRI NICSIFLGGA DDRETLAFAV RMTNQPYVNL 660
  661 TVLKLVDGEN VSHLNDVVEK RLDFRTIEKF RQDTMNKHNV ALREEASDLV NLLREEGNNY 720
  721 DLIMVGIRHE KSFEVLQGLS VWSEIEELGE IGDLLVSRDL KLSASVLAVQ QQLSSVVEEV 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle