| Protein: | gi|15241034, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 780 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15241034, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
471.0 | [0..5] | [776..1] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MNNSVTSNGT HEFVCEAWLG SSSGGLLRGD DPLKYSTPLL LLLISLVSSL SSVFQALLRP 60
61 LANVDFVTQI LAGIFLGPSA LGQNIDLVKK LF
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [93-457] |
1 11 21 31 41 51
| | | | | |
1 NTRSYFIIES FEAISFMFIS YISTAQVDMG VIKRGGKLAI INGLSLFLFP YVVGAIACTV 60
61 ITSNIRGTVA KNNPEQLHNL LTNQSVVYFQ VAYSVLSNLK MLNSEPGRLA LSSIMVANCF 120
121 GWGFFLLLIT FDSFLHQNYS KTTYLPTFTK VLLLVGIVVV CRPIFNWIVK RTPEGKKLKA 180
181 SHLCTICVML CTATFLSETV GFPYVVGSVA LGLVTPKTPP FGTGLTDKIG SFCYAVLMPC 240
241 YVIGIGNKVD FFSFNLRDII SLEFLIFTIS AAKFASIVLP SLYFQVPISH AVIVGFIVCI 300
301 QGIYDVQIFK QLLNYKNISH EAFGIMVISA MVHSTIFTAI VKNLYGWVQR KHITYRRQTV 360
361 QHYEP
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 1zcdA |
| Description: | Crystal structure of the Na+/H+ antiporter NhaA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [458-627] |
1 11 21 31 41 51
| | | | | |
1 NKPLKILTCF YHRETVPPIL TVLELSTCPS SASSHSIVSV NLEELEQNNV PLLIQHHPGH 60
61 NDESSTSSSR RDQISKAFEK FRSGHDLQEN VSVECFTAVA PSKTMHEDVC ALAFEKETDL 120
121 IIFGMADGTA AERRLCRNVR NASPSSVAVL MDQGRLPDFK NMGTAMKNGS
|
| Detection Method: | |
| Confidence: | 7.69897 |
| Match: | 1lnqA |
| Description: | Potassium channel-related protein MthK |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.26736023026862 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.68812524232244 | bayes_pls_golite062009 |
|
Region A: Residues: [628-780] |
1 11 21 31 41 51
| | | | | |
1 MRINICSIFL GGADDRETLA FAVRMTNQPY VNLTVLKLVD GENVSHLNDV VEKRLDFRTI 60
61 EKFRQDTMNK HNVALREEAS DLVNLLREEG NNYDLIMVGI RHEKSFEVLQ GLSVWSEIEE 120
121 LGEIGDLLVS RDLKLSASVL AVQQQLSSVV EEV
|
| Detection Method: | |
| Confidence: | 1.17 |
| Match: | 1wjgA |
| Description: | Crystal structure of a probable ATP binding protein from thermus themophilus HB8 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.257625842690978 | bayes_pls_golite062009 |
