YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15232334, gi|...

General Information:
Name(s) found: gi|7287994 [NCBI NR]
gi|18766549 [NCBI NR]
gi|15232334 [NCBI NR]
gi|11273995 [NCBI NR]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • gi|7287994|emb|CAB81832.1| myb protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|18766549|gb|AAL79015.1|AF469468_1 putative transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|15232334|ref|NP_191605.1| DUO1 (DUO POLLEN 1); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||T47857 myb protein-like - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: pollen sperm cell differentiation [IMP]
    regulation of transcription, DNA-dependent [ISS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAKKEEIKK GPWKAEEDEV LINHVKRYGP RDWSSIRSKG LLQRTGKSCR LRWVNKLRPN  60
   61 LKNGCKFSAD EERTVIELQS EFGNKWARIA TYLPGRTDND VKNFWSSRQK RLARILHNSS 120
  121 DASSSSFNPK SSSSHRLKGK NVKPIRQSSQ GFGLVEEEVT VSSSCSQMVP YSSDQVGDEV 180
  181 LRLPDLGVKL EHQPFAFGTD LVLAEYSDSQ NDANQQAISP FSPESRELLA RLDDPFYYDI 240
  241 LGPADSSEPL FALPQPFFEP SPVPRRCRHV SKDEEADVFL DDFPADMFDQ VDPIPSP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] PSI-BLAST 32.69897 CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES
    2 View Details [125..297] MSA 2.577996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle