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Protein Overview: WRK16_ARATH

General Information:
Name(s) found: WRK16_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1372 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: response to virus [IMP]
    plant-type hypersensitive response [IMP]
    Molecular Function: transcription factor activity [ISS]
    protein binding [IPI][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTESEQIVYI SCIEEVRYSF VSHLSKALQR KGVNDVFIDS DDSLSNESQS MVERARVSVM  60
   61 ILPGNRTVSL DKLVKVLDCQ KNKDQVVVPV LYGVRSSETE WLSALDSKGF SSVHHSRKEC 120
  121 SDSQLVKETV RDVYEKLFYM ERIGIYSKLL EIEKMINKQP LDIRCVGIWG MPGIGKTTLA 180
  181 KAVFDQMSGE FDAHCFIEDY TKAIQEKGVY CLLEEQFLKE NAGASGTVTK LSLLRDRLNN 240
  241 KRVLVVLDDV RSPLVVESFL GGFDWFGPKS LIIITSKDKS VFRLCRVNQI YEVQGLNEKE 300
  301 ALQLFSLCAS IDDMAEQNLH EVSMKVIKYA NGHPLALNLY GRELMGKKRP PEMEIAFLKL 360
  361 KECPPAIFVD AIKSSYDTLN DREKNIFLDI ACFFQGENVD YVMQLLEGCG FFPHVGIDVL 420
  421 VEKSLVTISE NRVRMHNLIQ DVGRQIINRE TRQTKRRSRL WEPCSIKYLL EDKEQNENEE 480
  481 QKTTFERAQV PEEIEGMFLD TSNLSFDIKH VAFDNMLNLR LFKIYSSNPE VHHVNNFLKG 540
  541 SLSSLPNVLR LLHWENYPLQ FLPQNFDPIH LVEINMPYSQ LKKLWGGTKD LEMLKTIRLC 600
  601 HSQQLVDIDD LLKAQNLEVV DLQGCTRLQS FPATGQLLHL RVVNLSGCTE IKSFPEIPPN 660
  661 IETLNLQGTG IIELPLSIVK PNYRELLNLL AEIPGLSGVS NLEQSDLKPL TSLMKISTSY 720
  721 QNPGKLSCLE LNDCSRLRSL PNMVNLELLK ALDLSGCSEL ETIQGFPRNL KELYLVGTAV 780
  781 RQVPQLPQSL EFFNAHGCVS LKSIRLDFKK LPVHYTFSNC FDLSPQVVND FLVQAMANVI 840
  841 AKHIPRERHV TGFSQKTVQR SSRDSQQELN KTLAFSFCAP SHANQNSKLD LQPGSSSMTR 900
  901 LDPSWRNTLV GFAMLVQVAF SEGYCDDTDF GISCVCKWKN KEGHSHRREI NLHCWALGKA 960
  961 VERDHTFVFF DVNMRPDTDE GNDPDIWADL VVFEFFPVNK QRKPLNDSCT VTRCGVRLIT1020
 1021 AVNCNTSIEN ISPVLSLDPM EVSGNEDEEV LRVRYAGLQE IYKALFLYIA GLFNDEDVGL1080
 1081 VAPLIANIID MDVSYGLKVL AYRSLIRVSS NGEIVMHYLL RQMGKEILHT ESKKTDKLVD1140
 1141 NIQSSMIATK EIEITRSKSR RKNNKEKRVV CVVDRGSRSS DLWVWRKYGQ KPIKSSPYPR1200
 1201 SYYRCASSKG CFARKQVERS RTDPNVSVIT YISEHNHPFP TLRNTLAGST RSSSSKCSDV1260
 1261 TTSASSTVSQ DKEGPDKSHL PSSPASPPYA AMVVKEEDME QWDNMEFDVD VEEDTFIPEL1320
 1321 FPEDTFADMD KLEENSQTMF LSRRSSGGNM EAQGKNSSDD REVNLPSKIL NR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] MSA 5.81899 View MSA. No confident structure predictions are available.
    2 View Details [136..586] PSI-BLAST 11.522879 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [587..701] PSI-BLAST 4.09691 No description for 2v70A was found.
    4 View Details [702..1142] PSI-BLAST 7.0 No description for 2z7xB was found.
    5 View Details [1143..1242] PSI-BLAST 6.154902 No description for 2aydA was found.
    6 View Details [1243..1372] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle