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Protein Overview: UFO_ARATH

General Information:
Name(s) found: UFO_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9755392|gb|AAF98199.1|AC000107_22 F17F8.16 [Arabidopsis thaliana] [NCBI NR]
  • gi|67633402|gb|AAY78626.1| unusual floral organ [Arabidopsis thaliana] [NCBI NR]
  • gi|30580598|sp|Q39090.2|UFO_ARATH RecName: Full=Protein UNUSUAL FLORAL ORGANS; AltName: Full=F-box only protein 1; Short=AtFBX1 [NCBI NR]
  • gi|225897986|dbj|BAH30325.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18397740|ref|NP_564368.1| UFO (UNUSUAL FLORAL ORGANS); transcription factor binding / ubiquitin-protein ligase [Arabidopsis thaliana] [NCBI NR]
  • Protein UNUSUAL FLORAL ORGANS OS=Arabidopsis thaliana GN=UFO PE=1 SV=2 [Swiss-Prot]
  • (Q39090) UNUSUAL FLORAL ORGANS protein [athaliana3702.FASTAC.txt]
  • UNUSUAL FLORAL ORGANS proteingi|18397740|ref|NP_564368.1| unusual floral organ (UFO) / F-box family protein (FBX1) [Arabidopsis thaliana]gi|9755392|gb|AAF98199.1| F17F8.16 [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 UNUSUAL FLORAL ORGANS protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: UFO | UFO (UNUSUAL FLORAL ORGANS); ubiquitin-protein ligase | chr1:11036161-11037489 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • F17F8.16 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unusual floral organ [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Protein UNUSUAL FLORAL ORGANS (F-box only protein 1) (AtFBX1) [nr-271106-contam.fasta]
  • UFO (UNUSUAL FLORAL ORGANS); ubiquitin-protein ligase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: UFO | F-box family protein | chr1:11036180-11037508 FORWARD LENGTH=442 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [IPI]
    Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [IGI]
    regulation of transcription, DNA-dependent [IDA]
    ubiquitin-dependent protein catabolic process [TAS]
    Molecular Function: ubiquitin-protein ligase activity [IMP][ISS]
    transcription factor binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTVFINNP SLTLPFSYTF TSSSNSSTTT STTTDSSSGQ WMDGRIWSKL PPPLLDRVIA  60
   61 FLPPPAFFRT RCVCKRFYSL LFSNTFLETY LQLLPLRHNC FLFFKHKTLK SYIYKRGGTN 120
  121 DDDSNKAEGF LFDPNEIRWY RLSFAYIPSG FYPSGSSGGL VSWVSEEAGL KTILLCNPLV 180
  181 GSVSQLPPIS RPRLFPSIGL SVTPTSIDVT VAGDDLISPY AVKNLSSESF HVDAGGFFSL 240
  241 WAMTSSLPRL CSLESGKMVY VQGKFYCMNY SPFSVLSYEV TGNRWIKIQA PMRRFLRSPS 300
  301 LLESKGRLIL VAAVEKSKLN VPKSLRLWSL QQDNATWVEI ERMPQPLYTQ FAAEEGGKGF 360
  361 ECVGNQEFVM IVLRGTSLQL LFDIVRKSWL WVPPCPYSGS GGGSSGGGSD GEVLQGFAYD 420
  421 PVLTTPVVSL LDQLTLPFPG VC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] PSI-BLAST 5.09691 Skp2; Cyclin A/CDK2-associated p19, Skp2
    2 View Details [166..442] PSI-BLAST 40.0 1.35 angstrom structure of the Kelch domain of Keap1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle