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Protein Overview: SYP61_ARATH

General Information:
Name(s) found: SYP61_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|28380156|sp|Q946Y7.1|SYP61_ARATH RecName: Full=Syntaxin-61; Short=AtSYP61; AltName: Full=Osmotic stress-sensitive mutant 1 [NCBI NR]
  • gi|23297416|gb|AAN12965.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18396813|ref|NP_564310.1| SYP61 (SYNTAXIN OF PLANTS 61); SNAP receptor [Arabidopsis thaliana] [NCBI NR]
  • gi|16041650|gb|AAK40222.2|AF355754_1 syntaxin of plants 61 [Arabidopsis thaliana] [NCBI NR]
  • Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1 [Swiss-Prot]
  • (Q946Y7) Syntaxin 61 (AtSYP61) (Osmotic stess-sensitive mutant 1) [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|16041650|gb|AAK40222.2| syntaxin of plants 61 [Arabidopsis thaliana]gi|28380156|sp|Q946Y7|SY61_ARATH Syntaxin 61 (AtSYP61) (Osmotic stess-sensitive mutant 1)gi|18396813|ref|NP_564310.1| syntaxin 61 (SYP61) / osm [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Syntaxin 61 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATSYP61, OSM1, SYP61 | SYP61 (SYNTAXIN OF PLANTS 61) | chr1:10016419-10017828 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • syntaxin of plants 61 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Syntaxin-61 (AtSYP61) (Osmotic stress-sensitive mutant 1) [nr-271106-contam.fasta]
  • SYP61 (SYNTAXIN OF PLANTS 61) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SYP61, ATSYP61, OSM1 | syntaxin of plants 61 | chr1:10016433-10017842 FORWARD LENGTH=245 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: trans-Golgi network transport vesicle [ISS]
    Biological Process: cellular membrane fusion [ISS]
    intracellular protein transport [ISS]
    Molecular Function: SNAP receptor activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAQDPFYI VKEEIQDSID KLQSTFHKWE RISPDMGDQA HVAKELVATC GSIEWQVDEL  60
   61 EKAITVAAKD PSWYGIDEAE LEKRRRWTSN ARTQVRNVKS GVLAGKVSSG AGHASEVRRE 120
  121 LMRMPNSGEA SRYDQYGGRD DDGFVQSESD RQMLLIKQQD EELDELSKSV QRIGGVGLTI 180
  181 HDELVAQERI IDELDTEMDS TKNRLEFVQK KVGMVMKKAG AKGQMMMICF LLVLFIILFV 240
  241 LVFLT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..245] PSI-BLAST 26.69897 Syntaxin 1A N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • SNAP receptor activity
    		•  3.50393203740159 bayes_pls_golite062009
  • phosphatidic acid binding
    		•  3.16686091277844 bayes_pls_golite062009
  • SNARE binding
    		•  2.24965480325017 bayes_pls_golite062009
  • binding
    		•  2.18404492932496 bayes_pls_golite062009
  • protein binding
    		•  1.82422117934251 bayes_pls_golite062009
  • transporter activity
    		•  1.74189664015129 bayes_pls_golite062009
  • protein transporter activity
    		•  1.35810492956056 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.2360389745429 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.13101548288086 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.398018181744571 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.0981818568206971 bayes_pls_golite062009
  • phospholipid binding
    		•  0.0172309833091902 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.00476738027966683 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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