YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SYP61_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAQDPFYI VKEEIQDSID KLQSTFHKWE RISPDMGDQA HVAKELVATC GSIEWQVDEL  60
   61 EKAITVAAKD PSWYGIDEAE LEKRRRWTSN ARTQVRNVKS GVLAGKVSSG AGHASEVRRE 120
  121 LMRMPNSGEA SRYDQYGGRD DDGFVQSESD RQMLLIKQQD EELDELSKSV QRIGGVGLTI 180
  181 HDELVAQERI IDELDTEMDS TKNRLEFVQK KVGMVMKKAG AKGQMMMICF LLVLFIILFV 240
  241 LVFLT

Type	Start	End	Confidence
Cytoplasmic	1	222	0.98
Transmembrane Helix	223	244	0.91
Non-Cytoplasmic	245	245	0.99