| Protein: | SYP61_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 245 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYP61_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
161.0 | [0..12] | [244..131] |
|
Region A: Residues: [1-245] |
1 11 21 31 41 51
| | | | | |
1 MSSAQDPFYI VKEEIQDSID KLQSTFHKWE RISPDMGDQA HVAKELVATC GSIEWQVDEL 60
61 EKAITVAAKD PSWYGIDEAE LEKRRRWTSN ARTQVRNVKS GVLAGKVSSG AGHASEVRRE 120
121 LMRMPNSGEA SRYDQYGGRD DDGFVQSESD RQMLLIKQQD EELDELSKSV QRIGGVGLTI 180
181 HDELVAQERI IDELDTEMDS TKNRLEFVQK KVGMVMKKAG AKGQMMMICF LLVLFIILFV 240
241 LVFLT
|
| Detection Method: |  |
| Confidence: | 26.69897 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| phosphatidic acid binding | 3.16686091277844 | bayes_pls_golite062009 |
| SNARE binding | 2.24965480325017 | bayes_pls_golite062009 |
| binding | 2.18404492932496 | bayes_pls_golite062009 |
| protein binding | 1.82422117934251 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| protein transporter activity | 1.35810492956056 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.2360389745429 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.398018181744571 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.0981818568206971 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.00476738027966683 | bayes_pls_golite062009 |
