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Protein Overview: SR541_ARATH

General Information:
Name(s) found: SR541_ARATH [Swiss-Prot]
Description(s) found:
Found 21 descriptions.
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  • Signal recognition particle 54 kDa protein 1 OS=Arabidopsis thaliana GN=SRP-54A PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 479 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ISS]
    signal recognition particle, endoplasmic reticulum targeting [ISS]
    Biological Process: SRP-dependent cotranslational protein targeting to membrane [IEA]
    SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition [ISS]
    Molecular Function: GTP binding [IEA][ISS]
    nucleotide binding [IEA]
    7S RNA binding [IEA][ISS]
    nucleoside-triphosphatase activity [IEA]
    mRNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLAELGGRI TRAIQQMNNV TIIDEKVLND FLNEITRALL QSDVSFGLVE KMQTNIKKIV  60
   61 NLDDLAAGHN KRLIIEQAIF KELCRMLDPG KPAFAPKKAK PSVVMFVGLQ GAGKTTTCTK 120
  121 YAYYHQKKGY KAALVCADTF RAGAFDQLKQ NATKAKIPFY GSYTESDPVK IAVEGVDRFK 180
  181 KEKCDLIIVD TSGRHKQAAS LFEEMRQVAE ATEPDLVIFV MDSSIGQAAF EQAEAFKETV 240
  241 SVGAVIITKM DGHAKGGGAL SAVAATKSPV IFIGTGEHMD EFEVFDVKPF VSRLLGKGDW 300
  301 SGLVDKLQEV VPKDLQNELV ENLSQGNFTL RSMYDQFQCS LRIPLNQLFS MLPGISAEMM 360
  361 PKGHGEESRV KMKRYMTMMD SMTNKELDSP NPKIFNESRI MRIARGSGRL VREVMEMLEE 420
  421 YKRIAKTMKG IKIPKNGDMS KVIPPQMLKQ MGGMSGLQSL MKQMGSAKDM MGMFGGGGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..479] PSI-BLAST 111.0 No description for 2j37W was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle