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Protein Overview: RPP13_ARATH

General Information:
Name(s) found: RPP13_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7229449|gb|AAF42830.1|AF209730_1 RPP13 [Arabidopsis thaliana] [NCBI NR]
  • gi|6523056|emb|CAB62323.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|29839653|sp|Q9M667.2|RPP13_ARATH RecName: Full=Disease resistance protein RPP13; AltName: Full=Resistance to Peronospora parasitica protein 13 [NCBI NR]
  • gi|25090228|gb|AAN72257.1| At3g46530/F12A12_50 [Arabidopsis thaliana] [NCBI NR]
  • gi|15231449|ref|NP_190237.1| RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding [Arabidopsis thaliana] [NCBI NR]
  • gi|14335000|gb|AAK59764.1| AT3g46530/F12A12_50 [Arabidopsis thaliana] [NCBI NR]
  • gi|11278007|pir||T45590 hypothetical protein F12A12.50 - Arabidopsis thaliana [NCBI NR]
  • Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13 PE=2 SV=2 [Swiss-Prot]
  • (Q9M667) Disease resistance protein RPP13 (Resistance to Peronospora parasitica protein 13) [Swiss-Prot]
  • putative protein [Arabidopsis thaliana]gi|7229449|gb|AAF42830.1| RPP13 [Arabidopsis thaliana]gi|29839653|sp|Q9M667|RP13_ARATH Disease resistance protein RPP13 (Resistance to Peronospora parasitica protein 13)gi|25090228|gb|AAN72257.1| At3g46530/F12A12_ [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Disease resistance protein RPP13 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RPP13 | RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding | chr3:17141724-17144231 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Disease resistance protein RPP13 (Resistance to Peronospora parasitica protein 13) [nr-271106-contam.fasta]
  • RPP13 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein F12A12.50 - Arabidopsis thaliana [nr-271106-contam.fasta]
  • AT3g46530/F12A12_50 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g46530/F12A12_50 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13); ATP binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RPP13 | NB-ARC domain-containing disease resistance protein | chr3:17130739-17133246 REVERSE LENGTH=835 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 835 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [TAS]
    plasma membrane [IDA]
    Biological Process: defense response, incompatible interaction [IMP]
    defense response [ISS][TAS]
    plant-type hypersensitive response [IMP]
    Molecular Function: ATP binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE  60
   61 WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG RKMDAYSIVD DIRILKRRIL 120
  121 DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY 180
  181 EEKNRFIISI FGMGGLGKTA LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL 240
  241 GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR 300
  301 VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK 360
  361 CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH VAPIVFDLSF KELRHESKLC 420
  421 FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER 480
  481 GKVMSCRIHD LLRDVAIKKS KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN 540
  541 KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF 600
  601 DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI 660
  661 SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT KLESLRVLKL ATPTEVHLSL 720
  721 ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG 780
  781 FGRLRKLDLL MRSLDELQIE EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] MSA 2.854987 View MSA. No confident structure predictions are available.
    2 View Details [160..363] PSI-BLAST 10.0 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [364..835] PSI-BLAST 5.0 Rab geranylgeranyltransferase alpha-subunit, N-terminal domain; Rab geranylgeranyltransferase alpha-subunit, insert domain; Rab geranylgeranyltransferase alpha-subunit, C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
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