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Protein Overview: CP29A_ARATH

General Information:
Name(s) found: CP29A_ARATH [Swiss-Prot]
Description(s) found:
Found 21 descriptions.
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  • 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=CP29A PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 342 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    thylakoid [IDA]
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [ISS]
    poly(U) RNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASASSLSA FNPKSLPLCV SRPASVSVLP PSLSFKLHSD HLVSIFASSA LKCSSPAEYP  60
   61 SRFVRNVAVS SDFEVEEDDM FADGDDSAPV ERNSFSPDLK LFVGNLSFNV DSAQLAQLFE 120
  121 SAGNVEMVEV IYDKVTGRSR GFGFVTMSTA AEVEAAAQQF NGYEFEGRPL RVNAGPPPPK 180
  181 REESFSRGPR SGGYGSERGG GYGSERGGGY GSERGGGYGS ERGGGYGSQR SGGGYGGSQR 240
  241 SSYGSGSGSG SGSGSGNRLY VGNLSWGVDD MALENLFNEQ GKVVEARVIY DRDSGRSKGF 300
  301 GFVTLSSSQE VQKAINSLNG ADLDGRQIRV SEAEARPPRG QF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] PSI-BLAST 33.0 Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)
    2 View Details [94..342] PSI-BLAST 21.045757 Solution structure of Polypyrimidine Tract Binding protein RBD34 complexed with CUCUCU RNA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.30587477666777 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.22428546892165 bayes_pls_golite062009
  • protein binding
    		•  0.88951142240317 bayes_pls_golite062009
  • RNA binding
    		•  0.498012521772139 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle