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Protein Overview: RNS3_ARATH

General Information:
Name(s) found: RNS3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9295730|gb|AAF87036.1|AC006535_14 T24P13.23 [Arabidopsis thaliana] [NCBI NR]
  • gi|562000|gb|AAC48926.1| ribonuclease [NCBI NR]
  • gi|4262172|gb|AAD14489.1| 672 [NCBI NR]
  • pir||H86394 ribonuclease [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21618080|gb|AAM67130.1| ribonuclease, RNS3 [Arabidopsis thaliana] [NCBI NR]
  • gi|21436387|gb|AAM51363.1| putative ribonuclease RNS3 [Arabidopsis thaliana] [NCBI NR]
  • gi|18396065|ref|NP_564264.1| RNS3 (RIBONUCLEASE 3); RNA binding / endoribonuclease/ ribonuclease T2 [Arabidopsis thaliana] [NCBI NR]
  • gi|17380740|gb|AAL36200.1| putative ribonuclease, RNS3 [Arabidopsis thaliana] [NCBI NR]
  • gi|1173105|sp|P42815.1|RNS3_ARATH RecName: Full=Ribonuclease 3; Flags: Precursor [NCBI NR]
  • Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1 [Swiss-Prot]
  • (P42815) Ribonuclease 3 precursor (EC 3.1.27.1) [athaliana3702.FASTAC.txt]
  • ribonuclease, RNS3 [Arabidopsis thaliana]gi|21436387|gb|AAM51363.1| putative ribonuclease RNS3 [Arabidopsis thaliana]gi|17380740|gb|AAL36200.1| putative ribonuclease, RNS3 [Arabidopsis thaliana]gi|4262172|gb|AAD14489.1| 672gi|562000|gb|AAC48926.1| rib [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ribonuclease 3 precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RNS3 | RNS3 (RIBONUCLEASE 3); endoribonuclease | chr1:9292747-9293709 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • T24P13.23 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RNS3 (RIBONUCLEASE 3); RNA binding / endoribonuclease [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative ribonuclease, RNS3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Ribonuclease 3 precursor [nr-271106-contam.fasta]
  • 672 [nr-271106-contam.fasta]
  • putative ribonuclease RNS3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ribonuclease, RNS3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ribonuclease [nr-271106-contam.fasta]
  • | Symbols: RNS3 | ribonuclease 3 | chr1:9292760-9293722 REVERSE LENGTH=222 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 222 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: aging [IEP]
    Molecular Function: RNA binding [IEA]
    endoribonuclease activity [ISS]
    ribonuclease T2 activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFFIFILAL QQLYVQSFAQ DFDFFYFVLQ WPGAYCDSRH SCCYPQTGKP AADFGIHGLW  60
   61 PNYKTGGWPQ NCNPDSRFDD LRVSDLMSDL QREWPTLSCP SNDGMKFWTH EWEKHGTCAE 120
  121 SELDQHDYFE AGLKLKQKAN LLHALTNAGI KPDDKFYEMK DIENTIKQVV GFAPGIECNK 180
  181 DSSHNSQLYQ IYLCVDTSAS KFINCPVMPH GRCDSRVQFP KF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..222] PSI-BLAST 66.69897 Crystal Structure of the Nicotiana glutinosa Ribonuclease NW

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.090807370772125 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle